gplots: Various R Programming Tools for Plotting Data

Various R programming tools for plotting data, including: - calculating and plotting locally smoothed summary function as ('bandplot', 'wapply'), - enhanced versions of standard plots ('barplot2', 'boxplot2', 'heatmap.2', 'smartlegend'), - manipulating colors ('col2hex', 'colorpanel', 'redgreen', 'greenred', 'bluered', 'redblue', 'rich.colors'), - calculating and plotting two-dimensional data summaries ('ci2d', 'hist2d'), - enhanced regression diagnostic plots ('lmplot2', 'residplot'), - formula-enabled interface to 'stats::lowess' function ('lowess'), - displaying textual data in plots ('textplot', 'sinkplot'), - plotting a matrix where each cell contains a dot whose size reflects the relative magnitude of the elements ('balloonplot'), - plotting "Venn" diagrams ('venn'), - displaying Open-Office style plots ('ooplot'), - plotting multiple data on same region, with separate axes ('overplot'), - plotting means and confidence intervals ('plotCI', 'plotmeans'), - spacing points in an x-y plot so they don't overlap ('space').

Version: 3.0.4
Depends: R (≥ 3.0)
Imports: gtools, gdata, stats, caTools, KernSmooth
Suggests: grid, MASS, knitr
Published: 2020-07-05
Author: Gregory R. Warnes [aut], Ben Bolker [aut], Lodewijk Bonebakker [aut], Robert Gentleman [aut], Wolfgang Huber [aut], Andy Liaw [aut], Thomas Lumley [aut], Martin Maechler [aut], Arni Magnusson [aut], Steffen Moeller [aut], Marc Schwartz [aut], Bill Venables [aut], Tal Galili [ctb, cre]
Maintainer: Tal Galili <tal.galili at gmail.com>
BugReports: https://github.com/talgalili/gplots/issues
License: GPL-2
URL: https://github.com/talgalili/gplots
NeedsCompilation: no
Materials: NEWS ChangeLog
In views: Graphics
CRAN checks: gplots results

Downloads:

Reference manual: gplots.pdf
Vignettes: Venn Diagrams with gplots
Package source: gplots_3.0.4.tar.gz
Windows binaries: r-devel: gplots_3.0.3.zip, r-release: gplots_3.0.3.zip, r-oldrel: gplots_3.0.3.zip
macOS binaries: r-release: gplots_3.0.3.tgz, r-oldrel: gplots_3.0.4.tgz
Old sources: gplots archive

Reverse dependencies:

Reverse depends: a4Base, bayess, cellVolumeDist, COHCAP, corkscrew, DandEFA, DensParcorr, difconet, EBSeq, GSCA, HD2013SGI, highSCREEN, Hiiragi2013, iCheck, iCluster, made4, massiR, MBttest, MDplot, MetabolAnalyze, Meth27QC, MethTargetedNGS, mgsa, mlma, MLP, mma, MOQA, muma, NBBttest, NestLink, PRISMA, RCA, ReorderCluster, rnaseqWrapper, RnBeads, SCINA, swamp, SwimR, switchBox, tRanslatome
Reverse imports: ABAEnrichment, affycoretools, artMS, ASSIGN, asymmetry, BAMMtools, BatchQC, bingat, Biopeak, BNPMIXcluster, boundingbox, BUScorrect, cancerTiming, cbaf, CellScore, cellTree, CHETAH, ChIPseeker, chromswitch, CINdex, CluMSID, CNVPanelizer, cobindR, CoFRA, CoGAPS, cogena, colordistance, compcodeR, compEpiTools, consensus, contiBAIT, corregp, covid19.analytics, crmReg, crqa, DAPAR, debrowser, deco, DepecheR, DeSousa2013, dfConn, DiffBind, DiffNet, DmelSGI, DNMF, DPBBM, dynOmics, eegc, EGAD, EGSEA, eNetXplorer, ENmix, erccdashboard, expands, fDMA, flagme, Fletcher2013a, FLLat, flowCyBar, flowDensity, flowFit, GDCRNATools, geecc, GeneOverlap, GOexpress, graphsim, haploReconstruct, HIREewas, HMP, HTqPCR, ideal, ImmuneSpaceR, indirect, infercnv, IntClust, ionr, isomiRs, kissDE, KnowSeq, KSEAapp, les, liayson, LineagePulse, lmms, lmSupport, M3Drop, MAIT, matie, MetabolicSurv, metagene, metagenomeSeq, MetaIntegrator, MetaNeighbor, metaseqR, metaseqR2, methylPipe, MetProc, miRLAB, mitch, MLZ, mogsa, momr, MoonlightR, MSEtool, msmsEDA, MSstats, NCA, netboxr, OGSA, oneSENSE, optCluster, OUTRIDER, PAA, PathwaySplice, Patterns, phenoTest, PhyInformR, piano, plotMCMC, poliscidata, polyPK, Prize, pwOmics, qat, quantable, r4ss, RAM, RAMClustR, rcellminer, RcmdrPlugin.BiclustGUI, rdi, ReactomeGSA, Repitools, rexposome, rgsepd, RITAN, RNAdecay, RNAinteract, RobMixReg, robustSingleCell, ROCR, RPPanalyzer, scone, SCOPE, seriation, serieslcb, sesem, shapeR, sigQC, SingleCellSignalR, SpidermiR, sRACIPE, sRAP, STATegRa, STRINGdb, TFARM, tigre, TIMP, tmod, TopKLists, TransView, Trendy, TSCAN, uSORT, variancePartition, vulcan, washeR, wilson, yarn
Reverse suggests: AgiMicroRna, BioQC, CancerInSilico, ChemmineR, ChIPpeakAnno, clusternomics, cola, compendiumdb, condvis, CoRegNet, CSFA, DeepBlueR, dendextend, dendsort, DESeq, DGCA, enveomics.R, FRESA.CAD, gmodels, heatmaply, heplots, HistData, httk, interactiveDisplay, isobar, limma, Linnorm, matR, MCbiclust, MKmisc, MSnbase, multiClust, OmicsPLS, Onassis, PAFway, psichomics, PtH2O2lipids, rattle, RforProteomics, rich, RMassBank, sim1000G, simba, Single.mTEC.Transcriptomes, STAN, TargetScore, TargetScoreData, timeOmics, TOAST, varrank

Linking:

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