RepertoiR: Repertoire Graphical Visualization

Visualization platform for T cell receptor repertoire analysis output results. It includes comparison of sequence frequency among samples, network of similar sequences and convergent recombination source between species. Currently repertoire analysis is in early stage of development and requires new approaches for repertoire data examination and assessment as we intend to develop. No publication is available yet (will be available in the near future), Efroni (2021) <https:>.

Version: 0.0.1
Imports: circlize, grDevices, igraph, reshape2, stringdist, stringi, stringr
Suggests: testthat (≥ 3.0.0)
Published: 2021-10-25
Author: Ido Hasson ORCID iD [aut, cre], Sol Efroni [aut], Hagit Philip [aut], Alona Zilberberg [aut]
Maintainer: Ido Hasson <idoh at systemsbiomed.org>
BugReports: https://github.com/systemsbiomed/RepertoiR/issues
License: MIT + file LICENSE
URL: https://github.com/systemsbiomed/RepertoiR
NeedsCompilation: no
Materials: README NEWS
CRAN checks: RepertoiR results

Documentation:

Reference manual: RepertoiR.pdf

Downloads:

Package source: RepertoiR_0.0.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-release (x86_64): not available, r-oldrel: not available

Linking:

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