EvaluateCore: Quality Evaluation of Core Collections logo

Aravind, J.1, Kaur, V.2, Wankhede, D. P.3 and Nanjundan, J.4
  1. Division of Germplasm Conservation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
  2. Division of Germplasm Evaluation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
  3. Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
  4. ICAR-Indian Agricultural Research Institute, Regional Station, Wellington, Tamil Nadu.

minimal R version License: GPL v3 CRAN_Status_Badge Dependencies rstudio mirror downloads develVersion Github Code Size R-CMD-check Project Status: WIP lifecycle Last-changedate Zenodo DOI Website - pkgdown .


Description

Implements various quality evaluation statistics to assess the value of plant germplasm core collections using qualitative and quantitative phenotypic trait data according to Odong et al. (2015) doi:10.1007/s00122-012-1971-y.

Installation

The package can be installed from CRAN as follows:

# Install from CRAN
install.packages('EvaluateCore', dependencies=TRUE)

The development version can be installed from github as follows:

# Install development version from Github
devtools::install_github("aravind-j/EvaluateCore")

What’s new

To know whats new in this version type:

news(package='EvaluateCore')

CRAN page

Github page

Documentation website

Zenodo DOI

CRAN checks

Flavour CRAN check
Linux
r-devel-linux-x86_64-debian-clang CRAN check - r-devel-linux-x86_64-debian-clang
r-devel-linux-x86_64-debian-gcc CRAN check - r-devel-linux-x86_64-debian-gcc
r-devel-linux-x86_64-fedora-clang CRAN check - r-devel-linux-x86_64-fedora-clang
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r-patched-linux-x86_64 CRAN check - r-patched-linux-x86_64
r-release-linux-x86_64 CRAN check - r-release-linux-x86_64
Solaris
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Windows
r-devel-windows-ix86+x86_64 CRAN check - r-devel-windows-ix86+x86_64
r-release-windows-ix86+x86_64 CRAN check - r-release-windows-ix86+x86_64
r-oldrel-windows-ix86+x86_64 CRAN check - r-oldrel-windows-ix86+x86_64
MacOS
r-release-macos-x86_64 CRAN check - r-release-macos-x86_64
r-oldrel-macos-x86_64 CRAN check - r-oldrel-macos-x86_64

Citing EvaluateCore

To cite the methods in the package use:

citation("EvaluateCore")
To cite the R package 'EvaluateCore' in publications use:

  Aravind, J., Kaur, V., Wankhede, D. P. and Nanjundan, J. (2021).  EvaluateCore: Quality Evaluation of Core Collections. R
  package version 0.1.2, https://aravind-j.github.io/EvaluateCore/https://CRAN.R-project.org/package=EvaluateCore.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {EvaluateCore: Quality Evaluation of Core Collections},
    author = {J. Aravind and Vikender Kaur and Dhammaprakash Pandhari Wankhede and J. Nanjundan},
    year = {2021},
    note = {R package version 0.1.2},
    note = {https://aravind-j.github.io/EvaluateCore/},
    note = {https://CRAN.R-project.org/package=EvaluateCore},
  }

This free and open-source software implements academic research by the authors and co-workers. If you use it, please support
the project by citing the package.