CRAN Package Check Results for Package ubiquity

Last updated on 2021-04-15 09:50:19 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 17.89 149.02 166.91 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.3 16.42 109.86 126.28 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.3 213.39 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.3 205.40 ERROR
r-devel-windows-ix86+x86_64 1.0.3 40.00 162.00 202.00 NOTE
r-devel-windows-x86_64-gcc10-UCRT 1.0.3 NOTE
r-patched-linux-x86_64 1.0.3 18.57 137.43 156.00 OK
r-patched-solaris-x86 1.0.3 248.40 WARN
r-release-linux-x86_64 1.0.3 17.88 138.48 156.36 OK
r-release-macos-x86_64 1.0.3 WARN
r-release-windows-ix86+x86_64 1.0.3 39.00 190.00 229.00 NOTE
r-oldrel-macos-x86_64 1.0.3 WARN
r-oldrel-windows-ix86+x86_64 1.0.3 25.00 127.00 152.00 NOTE

Check Details

Version: 1.0.3
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-x86_64-gcc10-UCRT

Version: 1.0.3
Check: examples
Result: ERROR
    Running examples in ‘ubiquity-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: tic
    > ### Title: Implementation of Matlab 'tic()' command
    > ### Aliases: tic
    >
    > ### ** Examples
    >
    > tic()
    Error in assign(".type", type, envir = baseenv()) :
     cannot add binding of '.type' to the base environment
    Calls: tic -> assign
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.3
Check: installed package size
Result: NOTE
     installed size is 9.6Mb
     sub-directories of 1Mb or more:
     doc 6.5Mb
     ubinc 2.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.3
Check: examples
Result: ERROR
    Running examples in ‘ubiquity-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: tic
    > ### Title: Implementation of Matlab 'tic()' command
    > ### Aliases: tic
    >
    > ### ** Examples
    >
    > tic()
    Error in assign(".type", type, envir = baseenv()) :
     cannot add binding of '.type' to the base environment
    Calls: tic -> assign
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Deployment.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Deployment.Rmd’
    
    --- re-building ‘Estimation.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Estimation.Rmd’
    
    --- re-building ‘Language.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Language.Rmd’
    
    --- re-building ‘NCA.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 195-196 (NCA.Rmd)
    Error: processing vignette 'NCA.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘NCA.Rmd’
    
    --- re-building ‘Reporting.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Reporting.Rmd’
    
    --- re-building ‘Simulation.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: ubiquity
    Loading required package: deSolve
    Loading required package: ggplot2
    Loading required package: foreach
    Loading required package: doParallel
    Loading required package: iterators
    Loading required package: parallel
    Loading required package: rhandsontable
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 95-97 (Simulation.Rmd)
    Error: processing vignette 'Simulation.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘Simulation.Rmd’
    
    --- re-building ‘Titration.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 278-279 (Titration.Rmd)
    Error: processing vignette 'Titration.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘Titration.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘NCA.Rmd’ ‘Simulation.Rmd’ ‘Titration.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘Deployment.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Deployment.Rmd’
    
    --- re-building ‘Estimation.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Estimation.Rmd’
    
    --- re-building ‘Language.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Language.Rmd’
    
    --- re-building ‘NCA.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 195-196 (NCA.Rmd)
    Error: processing vignette 'NCA.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘NCA.Rmd’
    
    --- re-building ‘Reporting.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Reporting.Rmd’
    
    --- re-building ‘Simulation.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: ubiquity
    Loading required package: deSolve
    Loading required package: ggplot2
    Loading required package: foreach
    Loading required package: doParallel
    Loading required package: iterators
    Loading required package: parallel
    Loading required package: rhandsontable
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 95-97 (Simulation.Rmd)
    Error: processing vignette 'Simulation.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘Simulation.Rmd’
    
    --- re-building ‘Titration.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 278-279 (Titration.Rmd)
    Error: processing vignette 'Titration.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘Titration.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘NCA.Rmd’ ‘Simulation.Rmd’ ‘Titration.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64