CRAN Package Check Results for Package sigminer

Last updated on 2020-03-30 20:48:42 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.11 13.41 158.34 171.75 OK
r-devel-linux-x86_64-debian-gcc 0.1.11 10.19 117.60 127.79 OK
r-devel-linux-x86_64-fedora-clang 0.1.11 162.87 WARN
r-devel-linux-x86_64-fedora-gcc 0.1.11 191.57 OK
r-devel-windows-ix86+x86_64 0.1.11 37.00 127.00 164.00 WARN
r-devel-windows-ix86+x86_64-gcc8 0.1.11 29.00 136.00 165.00 WARN
r-patched-linux-x86_64 0.1.11 13.01 147.73 160.74 OK
r-patched-solaris-x86 0.1.11 257.30 WARN
r-release-linux-x86_64 0.1.11 11.98 132.89 144.87 OK
r-release-windows-ix86+x86_64 0.1.11 40.00 199.00 239.00 OK
r-release-osx-x86_64 0.1.11 ERROR
r-oldrel-windows-ix86+x86_64 0.1.11 28.00 216.00 244.00 OK
r-oldrel-osx-x86_64 0.1.11 ERROR

Additional issues

donttest

Check Details

Version: 0.1.11
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘sigminer.Rmd’ using rmarkdown
    Quitting from lines 59-61 (sigminer.Rmd)
    Error: processing vignette 'sigminer.Rmd' failed with diagnostics:
    To read gz and bz2 files directly, fread() requires 'R.utils' package which cannot be found. Please install 'R.utils' using 'install.packages('R.utils')'.
    --- failed re-building ‘sigminer.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘sigminer.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.11
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'sigminer.Rmd' using rmarkdown
    Quitting from lines 68-72 (sigminer.Rmd)
    Error: processing vignette 'sigminer.Rmd' failed with diagnostics:
    package 'S4Vectors' could not be loaded
    --- failed re-building 'sigminer.Rmd'
    
    SUMMARY: processing the following file failed:
     'sigminer.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 0.1.11
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘sigminer.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 59-61 (sigminer.Rmd)
    Error: processing vignette 'sigminer.Rmd' failed with diagnostics:
    To read gz and bz2 files directly, fread() requires 'R.utils' package which cannot be found. Please install 'R.utils' using 'install.packages('R.utils')'.
    --- failed re-building ‘sigminer.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘sigminer.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.1.11
Check: package dependencies
Result: ERROR
    Package required but not available: ‘maftools’
    
    Package suggested but not available for checking: ‘BSgenome.Hsapiens.UCSC.hg19’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 0.1.11
Check: package dependencies
Result: ERROR
    Package required but not available: ‘maftools’
    
    Packages suggested but not available for checking:
     ‘BSgenome’ ‘BSgenome.Hsapiens.UCSC.hg19’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-osx-x86_64