CRAN Package Check Results for Package secrlinear

Last updated on 2020-04-09 15:54:01 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 15.25 181.83 197.08 OK
r-devel-linux-x86_64-debian-gcc 1.1.1 12.00 139.93 151.93 OK
r-devel-linux-x86_64-fedora-clang 1.1.1 227.48 OK
r-devel-linux-x86_64-fedora-gcc 1.1.1 246.69 OK
r-devel-windows-ix86+x86_64 1.1.1 32.00 276.00 308.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.1.1 34.00 197.00 231.00 OK
r-patched-linux-x86_64 1.1.1 12.95 176.40 189.35 OK
r-patched-osx-x86_64 1.1.1 WARN
r-patched-solaris-x86 1.1.1 394.70 OK
r-release-linux-x86_64 1.1.1 13.18 162.78 175.96 OK
r-release-windows-ix86+x86_64 1.1.1 34.00 245.00 279.00 OK
r-release-osx-x86_64 1.1.1 OK
r-oldrel-windows-ix86+x86_64 1.1.1 26.00 180.00 206.00 OK
r-oldrel-osx-x86_64 1.1.1 OK

Check Details

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘secrlinear-vignette.Rmd’ using rmarkdown
    Loading required package: secr
    This is secr 4.2.0. For overview type ?secr
    Loading required package: sp
    Loading required package: igraph
    
    Attaching package: 'igraph'
    
    The following objects are masked from 'package:stats':
    
     decompose, spectrum
    
    The following object is masked from 'package:base':
    
     union
    
    rgdal: version: 1.4-8, (SVN revision 845)
     Geospatial Data Abstraction Library extensions to R successfully loaded
     Loaded GDAL runtime: GDAL 2.4.2, released 2019/06/28
     Path to GDAL shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/rgdal/gdal
     GDAL binary built with GEOS: FALSE
     Loaded PROJ.4 runtime: Rel. 5.2.0, September 15th, 2018, [PJ_VERSION: 520]
     Path to PROJ.4 shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/rgdal/proj
     Linking to sp version: 1.4-1
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning in secr.fit(arvicola, mask = glymemask, trace = FALSE) :
     using Euclidean distances with linear mask
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
     Consider formula(paste(x, collapse = " ")) instead.
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'secrlinear-vignette.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘secrlinear-vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘secrlinear-vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64