CRAN Package Check Results for Package RZooRoH

Last updated on 2020-03-30 20:48:41 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.3 8.79 77.01 85.80 OK
r-devel-linux-x86_64-debian-gcc 0.2.3 6.66 59.27 65.93 OK
r-devel-linux-x86_64-fedora-clang 0.2.3 102.18 OK
r-devel-linux-x86_64-fedora-gcc 0.2.3 101.36 OK
r-devel-windows-ix86+x86_64 0.2.3 21.00 144.00 165.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 0.2.3 20.00 126.00 146.00 OK
r-patched-linux-x86_64 0.2.3 7.40 74.31 81.71 OK
r-patched-solaris-x86 0.2.3 127.00 OK
r-release-linux-x86_64 0.2.3 7.14 71.38 78.52 OK
r-release-windows-ix86+x86_64 0.2.3 24.00 181.00 205.00 OK
r-release-osx-x86_64 0.2.3 OK
r-oldrel-windows-ix86+x86_64 0.2.3 22.00 175.00 197.00 OK
r-oldrel-osx-x86_64 0.2.3 OK

Check Details

Version: 0.2.3
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'testthat.R' [10s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(RZooRoH)
     >
     > test_check("RZooRoH")
     [1] "Number of positions in original file ::"
     [2] "14831"
     [1] "Number of positions after MAF filtering ::"
     [2] "14831"
     [1] "Number of positions in original file ::"
     [2] "14831"
     [1] "Number of positions after MAF filtering ::"
     [2] "11371"
     [1] "Number of positions in original file ::"
     [2] "10000"
     [1] "Number of positions after MAF filtering ::"
     [2] "9598"
     -- 1. Failure: Reading genosim (@test1.R#24) ----------------------------------
     round(data1@freqs[20], 2) not equal to 0.52.
     1/1 mismatches
     [1] 0.53 - 0.52 == 0.01
    
     [1] "Number of positions in original file ::"
     [2] "1000"
     [1] "Number of positions after MAF filtering ::"
     [2] "1000"
     [1] "Number of positions in original file ::"
     [2] "1000"
     [1] "Number of positions after MAF filtering ::"
     [2] "1000"
     [1] "Number of positions in original file ::"
     [2] "1000"
     [1] "Number of positions after MAF filtering ::"
     [2] "1000"
     [1] "Number of positions in original file ::"
     [2] "1000"
     [1] "Number of positions after MAF filtering ::"
     [2] "1000"
     [1] "Number of positions in original file ::"
     [2] "6370"
     [1] "Number of positions after MAF filtering ::"
     [2] "6370"
     final value 6127.228984
     converged
     [1] "Number of positions in original file ::"
     [2] "6370"
     [1] "Number of positions after MAF filtering ::"
     [2] "6370"
     [1] "EM algorithm, iterations and loglik :: 101 -6128.59636506626"
     [1] "EM algorithm, iterations and loglik :: 101 -5767.65950055702"
     [1] "Number of positions in original file ::"
     [2] "6370"
     [1] "Number of positions after MAF filtering ::"
     [2] "6370"
     final value 6127.228984
     converged
     final value 5767.659061
     converged
     final value 5763.247991
     converged
     final value 5809.962884
     converged
     final value 5758.887693
     converged
     final value 5383.740551
     converged
     [1] "Number of positions in original file ::"
     [2] "6370"
     [1] "Number of positions after MAF filtering ::"
     [2] "6370"
     final value 6128.132841
     converged
     final value 5768.035614
     converged
     final value 5762.587394
     converged
     final value 5811.283672
     converged
     final value 5760.370243
     converged
     final value 5387.766858
     converged
     == testthat results ===========================================================
     [ OK: 60 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
     1. Failure: Reading genosim (@test1.R#24)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64